rs11075451 chr16:62041632 T>G
- Sequence
cctctagcgtgcaatatctgtgca[T/G]gttgctatgtacaaggaggaggaa
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte D54 (glioblastoma)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.71 | 1.40 | 1.60 | n/a | No Hit | |||
| SMC3_HUMAN | -0.29 | 1.52 | 1.89 | n/a | n/a | |||
| RAD21_HUMAN | 0.42 | 1.34 | 1.81 | n/a | n/a |
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