rs11083720 chr19:43777340 G>T
- Sequence
tgtgtgtgtgggtgtgtgtgtgtg[G/T]tgtctagaaaaagacatctagcct
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- NFIC_HUMAN RING2_HUMAN ATF3_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | n/a | 2.53 | 2.00 | n/a | No Hit | |||
| RING2_HUMAN | n/a | 2.52 | 2.00 | n/a | n/a | |||
| ATF3_HUMAN | n/a | 1.97 | 2.00 | n/a | No Hit | |||
| MEF2B_HUMAN | 1.67 | -1.91 | 1.33 | n/a | No Hit |
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