rs11086444 chr20:53869740 C>A
- Sequence
aatgaaaacaactggttacaaaat[C/A]gtacttttagtcagaattcataga
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells) breast tumor tissue
- ASB for transcription factors
- RB_HUMAN ESR1_HUMAN EWS_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RB_HUMAN | 2.45 | -2.50 | 1.33 | n/a | n/a | |||
| ESR1_HUMAN | 1.97 | -0.68 | 2.25 | n/a | No Hit | |||
| EWS_HUMAN | 2.24 | -3.29 | 2.00 | n/a | n/a |
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