rs1109857 chr12:119603303 C>T
- Sequence
caaaaaaagtaaaaagaaagaaat[C/T]cagatagaacctcccctcctaagt
- ASB in cell types
- HEK293 (embryonic kidney)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | -0.47 | 0.81 | 1.98 |
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Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), hdl cholesterol change with statins, height, microalbuminuria, neuroticism, parkinsons disease
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Thyroid, Whole_Blood