rs11121411 chr1:9429153 G>A
- Sequence
gcgcgcgggaggccgtgctgggac[G/A]cagagcccgaaaacctatttgagg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- ZN143_HUMAN GATD1_HUMAN KDM5B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN143_HUMAN | 1.68 | -1.49 | 1.00 | 0.90 | Weak Discordant | |||
| GATD1_HUMAN | 1.40 | -1.67 | 1.33 | n/a | n/a | |||
| KDM5B_HUMAN | 1.09 | n/a | 2.00 | n/a | n/a |
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Motif analysis
