rs111232194 chr17:20843909 C>A
- Sequence
gcgtcgccttccctgacaccaaga[C/A]gacctactgcttcgacgccttccc
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZBT26_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT26_HUMAN | 2.71 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Putamen_basal_ganglia, Lung, Muscle_Skeletal, Nerve_Tibial, Spleen, Testis, Thyroid, Whole_Blood