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rs11135737 chr8:23427804 C>A

Sequence
atctattaatagaaagaggctgga[C/A]tgcgcaagggcagggggactagcc
ASB in cell types
HepG2 (hepatoblastoma) cranial neural crest cells
ASB for transcription factors
TEAD3_HUMAN COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TEAD3_HUMAN -2.85 2.65 1.008.5·10-6 1.33 n/a n/a
COT1_HUMAN -3.45 2.45 1.003.6·10-3 2.00 1.65 Weak Concordant
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Motif analysis

COT1_HUMAN Weak Concordant
COT1_HUMAN pic

Genetic associations

GRASP ldl cholesterol microalbuminuria total cholesterol urinary albumin-to-creatinine ratio
GTEx eQTL Artery_Tibial Cells_Cultured_fibroblasts Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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