rs111366 chr16:77971636 C>T
- Sequence
tcaagagctgtcaccctcactttt[C/T]cgacccagaagatgtttgcacaag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.30 | 1.38 | 2.67 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.11 | 1.30 | 3.14 | n/a | No Hit | |||
| FOXK2_HUMAN | n/a | 1.68 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, eye color, hip bone mineral density (bmd), primary rhegmatogenous retinal detachment, serum creatinine, spine bone mineral density (bmd), total cholesterol