rs111401521 chr2:173076022 C>T
- Sequence
gccaggtaggggtcaggctggagc[C/T]cgcggagggcggggagggaggggg
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.62 | 1.13 | 1.48 | -4.61 | Discordant | |||
| RAD21_HUMAN | 0.67 | 0.91 | 2.00 | n/a | n/a |
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Motif analysis
