rs11149678 chr16:84726267 C>T
- Sequence
agcgtctcctgaagccgaaagtgg[C/T]gtttcccgcagttccggcgggaga
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) HEK293 (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- STAT1_HUMAN PRD10_HUMAN NR2C1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -2.98 | 2.28 | 2.50 | n/a | No Hit | |||
| PRD10_HUMAN | 0.91 | 2.27 | 2.25 | n/a | n/a | |||
| NR2C1_HUMAN | -3.30 | 1.74 | 2.50 | n/a | No Hit |
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