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rs11154342 chr6:126054569 T>A

Sequence
acagtgctgacggtgtaggcctgc[T/A]gaagagcaagctgatgaaaataaa
ASB in cell types
VCaP (prostate carcinoma) MDA-MB-453 (breast adenocarcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.14 0.69 0.040.90 1.89 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose advanced age-related macular degeneration height ldl cholesterol change with statins total cholesterol change with statins waist hip ratio
GTEx eQTL Cells_Cultured_fibroblasts Muscle_Skeletal Pancreas Skin_Sun_Exposed_Lower_leg Stomach Thyroid

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