rs11157420 chr14:22122628 T>A
- Sequence
ccttaacactgctttctccaagtt[T/A]cacttccctaatcatctcttacct
- ASB in cell types
- GM12878 (female B-cells) monocyte-derived dendritic cells bipolar neuron
- ASB for transcription factors
- IKZF1_HUMAN CTCF_HUMAN SPI1_HUMAN MTA2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.11 | -1.36 | 1.33 | n/a | No Hit | |||
| CTCF_HUMAN | 1.13 | -0.23 | 1.31 | n/a | No Hit | |||
| SPI1_HUMAN | 2.02 | n/a | 2.25 | -1.62 | Weak Concordant | |||
| MTA2_HUMAN | 1.70 | n/a | 1.33 | n/a | n/a |
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Motif analysis
