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rs11164896 chr1:93304777 A>C

Sequence
tttgttctaaaggtcttttcctca[A/C]aatgcaattaggatccacatgcag
ASB in cell types
K562 (myelogenous leukemia) transverse colon gastroesophageal sphincter
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.06 0.24 9.8·10-121.00 1.48 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Colon_Transverse Esophagus_Mucosa Liver Lung Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Spleen Testis Whole_Blood

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