rs11205275 chr1:153352680 G>A
- Sequence
acctttcactcactaggagtctct[G/A]agcaacctcttttatccatcactc
- ASB in cell types
- A549 (lung carcinoma) HEK293 (embryonic kidney) GM12878 (female B-cells) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN PKNX1_HUMAN RAD21_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.89 | 0.15 | 1.47 | n/a | No Hit | |||
| PKNX1_HUMAN | -1.57 | 2.28 | 1.33 | n/a | No Hit | |||
| RAD21_HUMAN | 1.56 | 0.04 | 1.88 | n/a | n/a | |||
| SMC3_HUMAN | 1.42 | -0.58 | 1.98 | n/a | n/a | |||
| ZN189_HUMAN | 2.43 | n/a | 2.00 | n/a | n/a |
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