rs112095234 chr7:76415141 C>G
- Sequence
tgtaatcccagcactttggaaggc[C/G]gaggtgggcggatcacgtgaggtc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EGR1_HUMAN MITF_HUMAN RAD51_HUMAN NFIC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | -2.42 | 2.44 | 1.42 | 4.79 | Concordant | |||
| MITF_HUMAN | -2.84 | 2.45 | 1.33 | n/a | No Hit | |||
| RAD51_HUMAN | -2.03 | 1.95 | 1.33 | n/a | n/a | |||
| NFIC_HUMAN | -1.70 | 1.51 | 1.33 | n/a | No Hit | |||
| KDM1A_HUMAN | -0.38 | 1.62 | 1.33 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Brain_Hypothalamus, Colon_Transverse, Esophagus_Muscularis, Lung, Skin_Sun_Exposed_Lower_leg, Thyroid, Uterus