rs11210982 chr1:44328088 G>A
- Sequence
cacagaatactgcatgcctgtggg[G/A]tggttcatagattccctgttctct
- ASB in cell types
- SK-N-SH (neuroblastoma) MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| SK-N-SH (neuroblastoma) | 0.36 | 1.02 | 1.33 | |||
| MCF7 (Invasive ductal breast carcinoma) | 0.94 | -0.16 | 2.07 |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. alzheimers disease without psychotic symptoms), alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. controls), college completion, rheumatoid arthritis, years of education
GTEx eQTL Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Thyroid