rs1122654 chr5:76403369 C>T
- Sequence
acttcagtgtcagcgcgcggcggc[C/T]gtggctggctctggcgagagagca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- REST_HUMAN RFOX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | n/a | 2.38 | 2.00 | 2.56 | Concordant | |||
| RFOX2_HUMAN | -1.96 | 2.29 | 2.00 | n/a | n/a |
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Motif analysis
