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rs11230908 chr11:62112672 A>C

Sequence
ctgcgcatgcgccctctgccccgc[A/C]ggagctgtaacagtagctgaagtt
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.70 0.09 0.010.94 1.29 -0.89 Weak Concordant
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Esophagus_Mucosa Thyroid

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