rs11233 chr19:55643352 G>A
- Sequence
ttctgctctctggagcggtgaacc[G/A]gtggttgtctgcggggaagagatg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- ZBT11_HUMAN FOXK2_HUMAN MNT_HUMAN EGR1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT11_HUMAN | 0.14 | 2.28 | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.03 | -2.06 | 1.33 | n/a | n/a | |||
| MNT_HUMAN | -0.75 | 1.42 | 1.73 | n/a | n/a | |||
| EGR1_HUMAN | -1.78 | 1.66 | 2.00 | n/a | No Hit | |||
| TIF1A_HUMAN | -1.62 | 2.12 | 2.00 | n/a | n/a |
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