rs112363642 chr19:1248349 G>A
- Sequence
tcggggtgcatctcagcccgcggc[G/A]aggcgggccgagacccttggctcg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN KDM1A_HUMAN EGR1_HUMAN ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.56 | -1.58 | 1.33 | n/a | n/a | |||
| KDM1A_HUMAN | -0.58 | 1.97 | 2.00 | n/a | n/a | |||
| EGR1_HUMAN | -0.73 | 1.81 | 2.00 | n/a | No Hit | |||
| ATF3_HUMAN | -2.76 | 2.22 | 2.00 | n/a | No Hit |
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