rs112449390 chr8:123768498 C>T
- Sequence
cttggagctgttcaggcgatccag[C/T]ctccaatcgctgctgctcttgtac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) CD14+ monocytes SKNO-1 (acute myeloid leukemia) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- STAT1_HUMAN GABPA_HUMAN RFX1_HUMAN ELK1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.06 | -0.57 | 2.00 | n/a | No Hit | |||
| GABPA_HUMAN | 1.48 | -1.76 | 1.50 | n/a | No Hit | |||
| RFX1_HUMAN | 2.30 | -3.18 | 2.00 | n/a | No Hit | |||
| ELK1_HUMAN | 1.66 | -1.96 | 1.50 | n/a | No Hit | |||
| HCFC1_HUMAN | 1.66 | -1.98 | 1.50 | n/a | n/a |
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