rs11259773 chr10:46285019 C>G
- Sequence
gcggcctcccggccttccttaccc[C/G]ggcggcctggcggccccgcgagct
- ASB in cell types
- K562 (myelogenous leukemia) neural cell
- ASB for transcription factors
- RAD21_HUMAN REST_HUMAN SKIL_HUMAN ZN592_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.03 | -1.99 | 1.00 | n/a | n/a | |||
| REST_HUMAN | 2.25 | -2.49 | 1.33 | n/a | No Hit | |||
| SKIL_HUMAN | 1.98 | -2.01 | 1.33 | n/a | n/a | |||
| ZN592_HUMAN | 1.87 | -1.90 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Coronary, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Whole_Blood