rs11260841 chr1:16621240 G>A
- Sequence
gtgataaccaccacccaaggccat[G/A]gggactgcagggtgagtggcatgc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) H1 (embryonic stem cells) esophagus muscularis mucosa spleen
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN ZNF24_HUMAN EMSY_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.30 | -0.07 | 2.12 | n/a | No Hit | |||
| RAD21_HUMAN | 2.59 | -3.18 | 2.13 | n/a | n/a | |||
| ZNF24_HUMAN | 2.42 | -2.11 | 2.10 | n/a | n/a | |||
| EMSY_HUMAN | 1.20 | n/a | 2.50 | n/a | n/a | |||
| PBX2_HUMAN | 3.28 | n/a | 1.50 | n/a | No Hit |
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Motif analysis
