rs1126154 chr22:17171516 T>C
- Sequence
ccgtcccgcggccccaccccgctc[T/C]gccatgggaagccgtagcttggcg
- ASB in cell types
- CD14+ monocytes thymus-derived CD34- cells
- ASB for transcription factors
- STAT1_HUMAN BC11B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 0.00 | 2.26 | 2.00 | n/a | No Hit | |||
| BC11B_HUMAN | -2.94 | 2.17 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid