rs112628457 chrX:76173469 C>T
- Sequence
actcctgggctcaggcgatccgcc[C/T]gcctcggcctcccaaagtgctggg
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- ZFX_HUMAN ZBT26_HUMAN CTCF_HUMAN HIC1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | 2.13 | -1.71 | 1.33 | n/a | No Hit | |||
| ZBT26_HUMAN | 2.41 | n/a | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.76 | -0.62 | 1.75 | n/a | No Hit | |||
| HIC1_HUMAN | 2.20 | n/a | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood