rs112936940 chr14:69726896 A>G
- Sequence
ctcagcagcgcccgggcctgcagc[A/G]gaggccggaggaagcgccacgggc
- ASB in cell types
- HCT-116 (colon carcinoma) HCT-116-RAD21-mAC
- ASB for transcription factors
- CTCF_HUMAN MAX_HUMAN ZFX_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.16 | 2.30 | 1.38 | -2.38 | Discordant | |||
| MAX_HUMAN | n/a | 2.20 | 1.33 | n/a | No Hit | |||
| ZFX_HUMAN | -1.12 | 1.44 | 1.00 | 1.44 | Weak Concordant | |||
| RAD21_HUMAN | -1.64 | 1.67 | 1.33 | n/a | n/a |
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Motif analysis
