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rs113483771 chr15:49620897 C>A

Sequence
agaggctgaggcggaacttcccgt[C/A]taaccccccccccgctgtcgtccc
ASB in cell types
liver
ASB for transcription factors
SP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP1_HUMAN 1.94 -1.75 0.021.00 1.33 -2.86 Concordant
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Motif analysis

SP1_HUMAN Concordant
SP1_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Lung Nerve_Tibial Ovary Skin_Not_Sun_Exposed_Suprapubic Testis Thyroid

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