ADASTRA v1.6.10
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rs11362
chr8:6877877
C
>
T
Sequence
ctcatggcgactggcaggcaacac[C/T]caggatttcaggaactggggagac
ASB in cell types
foreskin keratinocyte
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
-0.58
1.40
1.00
0.04
1.67
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hip bone mineral density (bmd)
,
prop taste detection threshold
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Coronary
,
Breast_Mammary_Tissue
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale