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rs113908268 chr13:41232042 C>T

Sequence
agctgtgatcacaccactgtactc[C/T]agcctgggcaacaggccaaggcct
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
BHE40_HUMAN IKZF1_HUMAN TBX21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN -1.65 1.98 1.005.6·10-3 1.33 n/a No Hit
IKZF1_HUMAN -0.97 1.10 1.000.03 1.33 n/a No Hit
TBX21_HUMAN -1.63 1.70 1.000.04 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Heart_Left_Ventricle Testis Thyroid

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