rs113948971 chr7:144256239 A>G
- Sequence
gtgaacctgtcaggaagcaggaac[A/G]gtgtgacaatgaataagctcctgg
- ASB in cell types
- mesenchymal stem cells LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- CEBPB_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 1.87 | -0.95 | 1.33 | n/a | No Hit | |||
| ZFX_HUMAN | 1.57 | -1.21 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid