rs114145484 chr6:125790762 C>G
- Sequence
cgggcccgggaccccgtagcggcc[C/G]atgccctgacggggggcgcagctg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN SPT5H_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.76 | 0.13 | 1.48 | 0.88 | Weak Discordant | |||
| SPT5H_HUMAN | 2.14 | -1.97 | 2.00 | n/a | n/a |
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Motif analysis
