rs114432938 chr5:1673489 C>G
- Sequence
atgtctcttagcctgtgtcctaaa[C/G]gtcatccaactgtaatcagagcag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- LMBL2_HUMAN MTG16_HUMAN ERR1_HUMAN ATF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| LMBL2_HUMAN | 2.32 | -2.56 | 1.33 | n/a | n/a | |||
| MTG16_HUMAN | 1.67 | n/a | 1.00 | n/a | n/a | |||
| ERR1_HUMAN | -2.31 | 2.09 | 1.50 | 5.71 | Concordant | |||
| ATF1_HUMAN | 2.00 | n/a | 1.33 | -5.39 | Concordant | |||
| COT1_HUMAN | -1.62 | 1.94 | 1.33 | n/a | No Hit |
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Motif analysis
