rs114788698 chr6:140050548 G>T
- Sequence
gacgactgttttctgggagttgca[G/T]gattgcgacagctttgtgcaagca
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF3_HUMAN CEBPA_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | 1.55 | -1.47 | 1.33 | 3.93 | Discordant | |||
| CEBPA_HUMAN | -3.14 | 2.38 | 2.00 | n/a | No Hit | |||
| CREB1_HUMAN | -1.83 | 1.90 | 2.00 | n/a | No Hit |
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Motif analysis
