rs1152880 chr12:67441881 T>C
- Sequence
gctcttgggagcacatcgtttgta[T/C]aagggcaaaggaaaagaaagggca
- ASB in cell types
- foreskin keratinocyte RH4 (alveolar rhabdomyosarcoma) OVCAR8 (high grade ovarian serous adenocarcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.52 | 0.83 | 1.35 | n/a | No Hit |
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