rs11540095 chr4:169757842 T>C
- Sequence
ttccggcagtacctgcggcccctc[T/C]ccgccgggcctgcgcttcccgcca
- ASB in cell types
- CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 2.33 | 2.50 | n/a | No Hit | |||
| EP300_HUMAN | -0.11 | 1.05 | 1.47 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Mucosa, Lung, Minor_Salivary_Gland, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Stomach, Testis, Thyroid