rs11542133 chr4:38998685 A>G
- Sequence
aaataaaatccatgtttcctttag[A/G]ctcacaaaccaaacacgaggagca
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.59 | -0.72 | 2.76 | n/a | No Hit |
Items per page:
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, college completion, hdl cholesterol change with statins, ldl cholesterol, ldl cholesterol change with statins, longstanding arthritis, rheumatoid arthritis, total cholesterol change with statins