rs115422278 chr8:102810954 G>A
- Sequence
cgtggccggggatgccgcgaggcc[G/A]cgcctccagggctgtgcgcgggcg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HCT-116 (colon carcinoma) 786-O (renal carcinoma)
- ASB for transcription factors
- EGR1_HUMAN MAZ_HUMAN KDM5B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | 0.11 | 1.57 | 1.71 | n/a | No Hit | |||
| MAZ_HUMAN | -1.96 | 1.73 | 1.50 | n/a | No Hit | |||
| KDM5B_HUMAN | -2.87 | 1.99 | 3.00 | n/a | n/a |
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