rs11545372 chr2:118013990 C>A
- Sequence
ctggccctccggccccctgggcaa[C/A]cccatgatccgaccgggctgtcgt
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293T (embryonic kidney) GM12878 (female B-cells) foreskin keratinocyte
- ASB for transcription factors
- ZFX_HUMAN ENL_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | 0.09 | 1.71 | 1.71 | n/a | No Hit | |||
| ENL_HUMAN | 1.89 | n/a | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 0.80 | 0.20 | 1.39 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid, Whole_Blood