rs11583829 chr1:39525802 A>C
- Sequence
aaggcctgcggctgccactgagtc[A/C]gcccgcccagccctactgcagcca
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- MEF2B_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 1.35 | -1.62 | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.50 | -0.81 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Testis, Whole_Blood