rs11584240 chr1:16905197 G>A
- Sequence
ctgtggcggggcggaagttcacat[G/A]tgtggtatgtagagcacatgttat
- ASB in cell types
- HEK293 (embryonic kidney) liver HCT-116 (colon carcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- FOXA1_HUMAN SP1_HUMAN TYY1_HUMAN GATA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.23 | 1.59 | 1.80 | n/a | No Hit | |||
| SP1_HUMAN | -0.66 | 1.52 | 1.44 | n/a | No Hit | |||
| TYY1_HUMAN | 0.03 | 1.72 | 1.60 | n/a | No Hit | |||
| GATA1_HUMAN | 2.26 | 1.97 | 1.50 | n/a | No Hit | |||
| ZXDB_HUMAN | n/a | 2.81 | 2.00 | n/a | n/a |
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