ADASTRA v1.6.10
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rs11584392
chr1:1112601
G
>
A
Sequence
gctccctccccccagtgaatacac[G/A]gggcatgctccctccctccagtga
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KAISO_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KAISO_HUMAN
1.38
-1.65
0.03
1.00
1.33
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Breast_Mammary_Tissue
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Lung
,
Nerve_Tibial
,
Pancreas
,
Prostate
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Stomach
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)