rs11586667 chr1:226008923 A>G
- Sequence
tctcattttccataaattagtaga[A/G]ggttttccttagaatatttaccag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EMSY_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EMSY_HUMAN | n/a | 2.29 | 2.50 | n/a | n/a | |||
| KDM1A_HUMAN | -3.22 | 1.81 | 2.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, college completion, diabetic retinopathy in type 2 diabetes mellitus, ldl cholesterol, total cholesterol, triglycerides, triglycerides change with statins, years of education
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid