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rs11587325 chr1:5348888 A>T

Sequence
cgtgccccagaaccaagcctcgcc[A/T]gcactgtgttgatgccatttcctc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
E2F1_HUMAN ZBT40_HUMAN GABP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
E2F1_HUMAN -1.89 1.67 1.001.2·10-5 1.33 n/a No Hit
ZBT40_HUMAN -1.78 1.57 1.001.1·10-3 1.33 n/a n/a
GABP1_HUMAN n/a 0.61 1.005.8·10-3 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum

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