ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs11587325
chr1:5348888
A
>
T
Sequence
cgtgccccagaaccaagcctcgcc[A/T]gcactgtgttgatgccatttcctc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
E2F1_HUMAN
ZBT40_HUMAN
GABP1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
E2F1_HUMAN
-1.89
1.67
1.00
1.2·10
-5
1.33
n/a
No Hit
ZBT40_HUMAN
-1.78
1.57
1.00
1.1·10
-3
1.33
n/a
n/a
GABP1_HUMAN
n/a
0.61
1.00
5.8·10
-3
1.33
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Visceral_Omentum
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)