rs11611690 chr12:131671463 G>A
- Sequence
gaagaaaatcctgccaggtgctac[G/A]ccgtggatgaatcctgaggttatt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- SMAD5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMAD5_HUMAN | n/a | 2.64 | 2.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, refractive error, sporadic creutzfeldt-jakob disease, tetrology of fallot
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Nerve_Tibial, Testis, Whole_Blood