rs116133465 chr7:135170794 C>A
- Sequence
cttccggtcttggggaactcccgg[C/A]cccctcgcagtcccggcgcccggg
- ASB in cell types
- CWR22 (prostate carcinoma) L1236 (Hodgkin lymphoma)
- ASB for transcription factors
- NFKB1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFKB1_HUMAN | -1.67 | 1.46 | 1.50 | n/a | No Hit | |||
| ANDR_HUMAN | 1.15 | -0.17 | 1.87 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Mucosa, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood