rs11616167 chr12:109116320 A>G
- Sequence
tttcagcatgtcacaggagggccc[A/G]gatgactttctgcctactgcttac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN TF65_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.42 | -1.00 | 2.17 | 0.93 | Weak Discordant | |||
| TF65_HUMAN | 2.67 | n/a | 2.00 | n/a | No Hit | |||
| GATA3_HUMAN | 1.04 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
