rs11642887 chr16:86248087 C>T
- Sequence
atttttttctttggctggcctgtg[C/T]gaaggtagaattgcgtggcaactg
- ASB in cell types
- cranial neural crest cells
- ASB for transcription factors
- COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | -1.80 | 2.26 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP college completion, hdl cholesterol change with statins, ldl cholesterol, microalbuminuria, sporadic creutzfeldt-jakob disease, stabilized warfarin dose, total cholesterol, years of education