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rs11647829 chr16:14370297 G>C

Sequence
ctggtctggggaggagagccctga[G/C]ccatgtgcaggccacagggatggg
ASB in cell types
breast tumor tissue HepG2 (hepatoblastoma)
ASB for transcription factors
ESR1_HUMAN GCR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 0.40 2.35 1.001.0·10-5 2.17 n/a No Hit
GCR_HUMAN n/a 1.95 1.000.05 2.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis Skin_Not_Sun_Exposed_Suprapubic

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