rs11649101 chr16:12612832 G>C
- Sequence
ctgctctgacttcaatcatcgtga[G/C]tcaccggttctgtagcagtcattc
- ASB in cell types
- HepG2 (hepatoblastoma) HCT-116 (colon carcinoma) liver 786-O (renal carcinoma)
- ASB for transcription factors
- JUN_HUMAN CREB1_HUMAN SP1_HUMAN TBX3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.53 | 1.76 | 1.72 | -5.79 | Discordant | |||
| CREB1_HUMAN | -0.20 | 2.83 | 2.67 | n/a | No Hit | |||
| SP1_HUMAN | 1.20 | -0.93 | 1.33 | n/a | No Hit | |||
| TBX3_HUMAN | -2.87 | 2.72 | 2.75 | n/a | No Hit |
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Motif analysis
