rs11651473 chr17:78592523 G>T
- Sequence
ggacatttattccactgtgacagg[G/T]ctcatctctgaggagcaccagact
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma) SK-N-SH (neuroblastoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- RAD21_HUMAN JUN_HUMAN TF65_HUMAN AP2A_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.50 | -0.48 | 2.93 | n/a | n/a | |||
| JUN_HUMAN | 1.71 | -0.92 | 3.00 | n/a | No Hit | |||
| TF65_HUMAN | 2.72 | n/a | 2.50 | n/a | No Hit | |||
| AP2A_HUMAN | 2.57 | n/a | 2.00 | n/a | No Hit | |||
| SMC3_HUMAN | 1.21 | -0.34 | 3.00 | n/a | n/a |
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